u/Thick_Weird6363

I'm fairly new to molecular docking and I learnt about analysis of receptor ligand interactions through a youtube tutorial but the result im getting is quite different from the one i saw on the tutorial, what i got seems to be a "simple" diagram and the one in the tutorial seems to be a "schematic" diagram.

what i need to know is the one that i got accurate or should i try to make it into a schematic diagram ? my PI did ask for ligand-receptor interactions but I don't know if he wanted it in 2D or 3D

The docking was done through autodock 4.2 and the ligand was obtained through IEDB(B-cell epitope prediction)